Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| murein hydrolase activator nlpd | O1Q98_15710 | Q56131 | + | 3482033 - 3483283 | 43006.0 |
| rna polymerase sigma factor rpos | O1Q98_15715 | P13445 | + | 3483337 - 3484329 | 38177.3 |
| proline--trna ligase | O1Q98_15720 | C6DDF6 | - | 3484438 - 3486156 | 63878.5 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | O1Q98_15725 | P28634 | - | 3486274 - 3486981 | 26307.7 |
| rcs stress response system protein rcsf | O1Q98_15730 | P69412 | - | 3486978 - 3487388 | 14334.5 |
| metq/nlpa family lipoprotein | O1Q98_15735 | Q8ZRN1 | - | 3487501 - 3488316 | 29318.3 |
| methionine abc transporter permease meti | O1Q98_15740 | Q8ZRN0 | - | 3488378 - 3489031 | 23197.7 |
| methionine abc transporter atp-binding protein metn | O1Q98_15745 | Q6D1C4 | - | 3489024 - 3490055 | 37918.2 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | O1Q98_15750 | P63229 | + | 3490235 - 3490810 | 21459.7 |
| 16s ribosomal rna | Not Available | Not Available | + | 3491171 - 3492710 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
