Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated endoribonuclease cas6/csy4 | O1Q98_15060 | Q6D0W5 | + | 3337074 - 3337628 | 20229.4 |
| amino acid permease | O1Q98_15065 | P59737 | - | 3339196 - 3340569 | 49717.2 |
| lrp/asnc family transcriptional regulator | O1Q98_15070 | F8DT92 | + | 3340939 - 3341415 | 17333.2 |
| yitt family protein | O1Q98_15075 | P54478 | + | 3341674 - 3342303 | 22670.5 |
| aspartate/tyrosine/aromatic aminotransferase | O1Q98_15080 | P04693 | + | 3342343 - 3343536 | 43341.9 |
| hypothetical protein | O1Q98_15085 | Not Available | + | 3343675 - 3344361 | 26844.8 |
| transporter substrate-binding domain-containing protein | O1Q98_15090 | Q01269 | + | 3344507 - 3345286 | 28893.5 |
| duf1471 domain-containing protein | O1Q98_15095 | P0AB42 | + | 3345529 - 3345777 | 8440.95 |
| alanine racemase | O1Q98_15100 | Q3V7N2 | - | 3345937 - 3347013 | 38864.5 |
| is5 family transposase | O1Q98_15105 | P0A1Q5 | - | 3347048 - 3348455 | 51142.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
