Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | O1Q98_14360 | C6DF08 | + | 3158847 - 3160022 | 41523.2 |
| is5 family transposase | O1Q98_14365 | P0A9G2 | + | 3160050 - 3160941 | 33831.1 |
| 30s ribosomal protein s20 | O1Q98_14370 | C6DF06 | - | 3161008 - 3161271 | 9764.97 |
| bifunctional riboflavin kinase/fad synthetase | O1Q98_14375 | P0AG42 | + | 3161680 - 3162621 | 33965.3 |
| isoleucine--trna ligase | O1Q98_14380 | C6DF04 | + | 3162656 - 3165481 | 104749.0 |
| signal peptidase ii | O1Q98_14385 | A7MIM2 | + | 3165481 - 3165990 | 18690.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | O1Q98_14390 | P0AEM2 | + | 3165994 - 3166452 | 16057.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | O1Q98_14395 | A8G9L7 | + | 3166449 - 3167399 | 34579.3 |
| ribonucleoside hydrolase rihc | O1Q98_14400 | B4TWP3 | + | 3167516 - 3168433 | 32683.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | O1Q98_14405 | Q3Z5X9 | + | 3168582 - 3169403 | 28734.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
