Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | O1Q98_06640 | A8GI17 | - | 1497033 - 1497986 | 33393.2 |
| tryptophan synthase subunit beta | O1Q98_06645 | Not Available | - | 1498214 - 1498555 | 12864.5 |
| type i secretion system permease/atpase | O1Q98_06650 | P23702 | + | 1499194 - 1501380 | 81248.5 |
| hlyd family efflux transporter periplasmic adaptor subunit | O1Q98_06655 | Q7ANN5 | + | 1501367 - 1502203 | 31588.2 |
| diguanylate cyclase | O1Q98_06660 | Q8THF6 | - | 1502228 - 1503745 | 56856.9 |
| hypothetical protein | O1Q98_06665 | Not Available | - | 1504150 - 1504452 | 11485.5 |
| cyclic-guanylate-specific phosphodiesterase | O1Q98_06670 | P37646 | - | 1504510 - 1505301 | 29932.8 |
| yfhl family 4fe-4s dicluster ferredoxin | O1Q98_06675 | P52102 | + | 1505651 - 1505911 | 9886.89 |
| is5 family transposase | O1Q98_06680 | A7MH03 | - | 1505918 - 1506320 | 13337.0 |
| pyridoxine 5'-phosphate synthase | O1Q98_06685 | Q3V7N3 | - | 1506320 - 1507051 | 26496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
