Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system assembly factor gspb | O1Q98_05235 | Q01563 | - | 1164737 - 1165387 | 23271.2 |
| type ii secretion system protein gspc | O1Q98_05240 | Q01564 | + | 1166565 - 1167383 | 30088.8 |
| type ii secretion system secretin gspd | O1Q98_05245 | Q01565 | + | 1167385 - 1169526 | 76656.6 |
| type ii secretion system atpase gspe | O1Q98_05250 | Q01566 | + | 1169523 - 1171019 | 55459.0 |
| type ii secretion system inner membrane protein gspf | O1Q98_05255 | P31704 | + | 1171021 - 1172247 | 44905.7 |
| type ii secretion system major pseudopilin gspg | O1Q98_05260 | P31585 | + | 1172281 - 1172733 | 16481.6 |
| type ii secretion system minor pseudopilin gsph | O1Q98_05265 | P24687 | + | 1172736 - 1173275 | 20186.1 |
| type ii secretion system minor pseudopilin gspi | O1Q98_05270 | P24688 | + | 1173289 - 1173666 | 14022.8 |
| type ii secretion system minor pseudopilin gspj | O1Q98_05275 | P24689 | + | 1173699 - 1174394 | 25322.6 |
| type ii secretion system minor pseudopilin gspk | O1Q98_05280 | P24690 | + | 1174391 - 1175479 | 39600.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
