Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Dickeya
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Dickeya |
| Species | Dickeya lacustris |
| Strain | S29 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Dickeya lacustris S29
Accession NumberCP114280.1
Gene Summary
Adenine Count
1019733 bp
Thymine Count
1028288 bp
Guanine Count
1167877 bp
Cytosine Count
1151875 bp
Genome Length
4367773 bp
Protein-coding Genes
3671 genes
Non-Coding Genes
291 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | O1Q98_05185 | P0DW48 | + | 1152204 - 1154114 | 71534.9 |
| hypothetical protein | O1Q98_05190 | Not Available | + | 1154271 - 1154867 | 21693.0 |
| sigma factor-like helix-turn-helix dna-binding protein | O1Q98_05195 | Q03066 | + | 1155293 - 1156684 | 51546.3 |
| is5 family transposase | O1Q98_05200 | P17985 | - | 1156696 - 1157803 | 39498.1 |
| is5 family transposase | O1Q98_05205 | P37326 | - | 1157875 - 1158489 | 23391.3 |
| Trna-arg | Not Available | Not Available | + | 1158667 - 1158743 | Not Available |
| duf3772 domain-containing protein | O1Q98_05215 | P39285 | + | 1159122 - 1161563 | 88405.5 |
| d-amino-acid transaminase | O1Q98_05220 | Q6GFV1 | - | 1161636 - 1162496 | 31833.2 |
| alanine transaminase | O1Q98_05225 | P77434 | + | 1162858 - 1164081 | 45330.6 |
| type ii secretion system pilot lipoprotein gsps | O1Q98_05230 | Q01567 | + | 1164300 - 1164653 | 12606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
