Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | RW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
848344 bp
Thymine Count
852584 bp
Guanine Count
1840848 bp
Cytosine Count
1840485 bp
Genome Length
5382261 bp
Protein-coding Genes
4972 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | SWIT_RS09850 | Not Available | - | 2183170 - 2183844 | 23708.8 |
| pentapeptide repeat-containing protein | SWIT_RS09855 | Not Available | + | 2183938 - 2184636 | 25849.6 |
| efflux transporter outer membrane subunit | SWIT_RS09860 | Not Available | - | 2184651 - 2186093 | 51572.3 |
| multidrug efflux rnd transporter permease subunit | SWIT_RS09865 | Not Available | - | 2186096 - 2189206 | 110823.0 |
| efflux rnd transporter periplasmic adaptor subunit | SWIT_RS09870 | Not Available | - | 2189221 - 2190360 | 40204.6 |
| response regulator transcription factor | SWIT_RS09875 | Not Available | + | 2190506 - 2191201 | 25158.5 |
| atp-binding protein | SWIT_RS09880 | Not Available | + | 2191201 - 2192307 | 39850.9 |
| 2-oxoadipate dioxygenase/decarboxylase family protein | SWIT_RS09885 | Not Available | - | 2192288 - 2193310 | 36325.9 |
| lysr substrate-binding domain-containing protein | SWIT_RS09890 | Not Available | + | 2193405 - 2194328 | 33521.1 |
| mbca/pars/xre antitoxin family protein | SWIT_RS09895 | Not Available | + | 2194408 - 2194785 | 13642.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.