Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | FD718_07735 | Not Available | - | 1682166 - 1683299 | 38924.0 |
| gntp family permease | FD718_07740 | Not Available | - | 1683310 - 1684575 | 42371.6 |
| xre family transcriptional regulator | FD718_07745 | Not Available | - | 1684707 - 1685864 | 43758.1 |
| upf0231 family protein | FD718_07750 | Not Available | + | 1685920 - 1686288 | 14308.5 |
| p-ii family nitrogen regulator | FD718_07755 | Not Available | + | 1686471 - 1686809 | 12348.0 |
| ammonium transporter | FD718_07760 | Not Available | + | 1686873 - 1688102 | 43037.5 |
| fe(3+) abc transporter substrate-binding protein | FD718_07765 | Not Available | + | 1688293 - 1689306 | 37681.9 |
| iron abc transporter permease | FD718_07770 | Not Available | + | 1689463 - 1691088 | 60517.3 |
| abc transporter atp-binding protein | FD718_07775 | Not Available | + | 1691091 - 1692128 | 37997.9 |
| lysr family transcriptional regulator | FD718_07780 | Not Available | - | 1692244 - 1692617 | 13868.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.