Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae 111bp-OG15A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1367470 bp
Thymine Count
1358376 bp
Guanine Count
932138 bp
Cytosine Count
927452 bp
Genome Length
4585436 bp
Protein-coding Genes
3981 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3363 domain-containing protein | FD721_00005 | Not Available | Positive | 66 - 779 | 26308.1 |
| chloramphenicol/florfenicol efflux mfs transporter flor | FD721_00010 | Not Available | Positive | 1056 - 2270 | 42616.3 |
| lysr family transcriptional regulator | FD721_00015 | Not Available | Positive | 2298 - 2603 | 11146.6 |
| is91 family transposase | FD721_00020 | Not Available | Positive | 2715 - 3277 | 21322.9 |
| restriction endonuclease subunit m | FD721_00025 | Not Available | Negative | 3380 - 4027 | 24090.2 |
| dna replication protein | FD721_00030 | Not Available | Positive | 4369 - 5262 | 33279.6 |
| hypothetical protein | FD721_00035 | Not Available | Negative | 5330 - 6412 | 40670.9 |
| hypothetical protein | FD721_00040 | Not Available | Negative | 6798 - 7613 | 30994.3 |
| duf1566 domain-containing protein | FD721_00045 | Not Available | Positive | 7964 - 9601 | 58689.1 |
| duf1566 domain-containing protein | FD721_00050 | Not Available | Positive | 9601 - 10152 | 20094.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |
