Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prolyl-trna synthetase | SAMEA3710568_00927 | Not Available | + | 887877 - 889595 | 63626.2 |
| putative lipoprotein | SAMEA3710568_00928 | Not Available | + | 889648 - 890472 | 29972.0 |
| lipoprotein involved with copper homeostasis and adhesion | SAMEA3710568_00929 | Not Available | - | 890627 - 891337 | 25897.8 |
| peptidyl-trna hydrolase domain-containing protein | SAMEA3710568_00930 | Not Available | - | 891351 - 891773 | 15604.9 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_00931 | Not Available | - | 891770 - 892315 | 20877.7 |
| uncharacterised protein family (upf0253) | SAMEA3710568_00932 | Not Available | + | 892481 - 892681 | 7214.59 |
| rho-binding antiterminator | SAMEA3710568_00933 | Not Available | + | 892668 - 892928 | 9698.45 |
| trna(ile)-lysidine synthetase | SAMEA3710568_00934 | Not Available | - | 892977 - 894275 | 48092.8 |
| putative lactoylglutathione lyase | SAMEA3710568_00935 | Not Available | - | 894340 - 894729 | 14707.4 |
| lysine decarboxylase, constitutive | SAMEA3710568_00936 | Not Available | - | 894786 - 896927 | 80582.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
