Shigella dysenteriae Sd197

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella dysenteriae Sd197 is a gram-negative, rod-shaped bacterium that belongs to the Enterobacteriaceae family. As a mesophilic organism, it thrives optimally at temperatures around 37°C. This microbe is classified as a chemoheterotroph, relying on organic compounds for energy and carbon, and is a facultative anaerobe, which means it can survive in both the presence and absence of oxygen.In terms of habitat, *Shigella dysenteriae* can primarily be found in the gastrointestinal tract of humans and other primates. It is known to inhabit the intestines, where it becomes pathogenic, causing bacillary dysentery. Transmission often occurs through contaminated food or water, emphasizing its significant role in public health concerns, especially in areas with poor sanitation.The pathogenicity of *S. dysenteriae* is largely attributed to its ability to invade the epithelial cells of the colon, leading to cell destruction and inflammatory responses. The bacterium produces a potent Shiga toxin, which can result in severe diarrhea, abdominal cramps, and even life-threatening complications, such as hemolytic uremic syndrome (HUS). Furthermore, *Shigella dysenteriae* exhibits notable resistance to many antibiotics, complicating treatment options for infections. This resistance often stems from the acquisition of plasmids carrying resistance genes, reflecting a growing concern for public health as it raises the stakes in controlling dysenteric outbreaks globally. Understanding the biology and pathogenic mechanisms of *S. dysenteriae Sd197* is crucial for developing effective prevention and therapeutic strategies against shigellosis, a disease that continues to impact vulnerable populations around the world.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella dysenteriae
StrainSd197

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella dysenteriae Sd197
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Shigella dysenteriae Sd197

Accession NumberNC_009344.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Abc transporterSDY_RS03435Not Available+669113 - 67017139116.9
bifunctional pyridoxal phosphate/fructose-1,6-bisphosphate phosphataseSDY_RS03440Not Available-670172 - 67099030040.8
IntegraseSDY_RS03445Not Available-671226 - 67166916532.8
Transposase insfSDY_RS03450Not Available-671726 - 67288244361.1
Transposase is1SDY_RS03460Not Available-672953 - 67364726658.3
AttlNot AvailableNot Available+673657 - 673668Not Available
Putative transposase orfbSDY_RS03465Not Available-673721 - 6739398894.42
Putative transposase orfbSDY_RS03470Not Available-673946 - 67511543832.2
Issod1, transposase orfaSDY_RS03475Not Available-675184 - 67604330889.0
Isxac3 transposaseSDY_RS03485Not Available+676139 - 67728942119.1

Displaying genes 1 – 10 of 4884 in total

Pathways

4 pathways

Metabolites

9 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0003419trimethylamineC3H9NChemical structure of trimethylamine75-50-3
Average59.1103Da
Monoisotopic59.07349929Da
BASm0004157menaquinol-8C51H74O2Chemical structure of menaquinol-8Not available
Average719.1321Da
Monoisotopic718.568881612Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0019034epoxyqueuosineC17H23N5O8Chemical structure of epoxyqueuosineNULL
Average425.3932Da
Monoisotopic425.154662737Da
BASm00190367-Aminomethyl-7-deazaguanosineC12H17N5O5Chemical structure of 7-Aminomethyl-7-deazaguanosineNULL
Average311.2939Da
Monoisotopic311.122968679Da
BASm0020436AcetosyringoneC10H12O4Chemical structure of Acetosyringone2478-38-8
Average196.1999Da
Monoisotopic196.073558872Da
BASm0034580Glycerone phosphateC3H5Li2O6PChemical structure of Glycerone phosphateNULL
Average181.924Da
Monoisotopic182.014382502Da

Displaying 1–9 of 9 metabolites