Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMEA3710568_00937 | Not Available | - | 897026 - 897985 | 35243.6 |
| dna polymerase iii subunit alpha | SAMEA3710568_00938 | Not Available | - | 897998 - 901480 | 129872.0 |
| ribonuclease hii | SAMEA3710568_00939 | Not Available | - | 901517 - 902113 | 21553.3 |
| lipid-a-disaccharide synthase | SAMEA3710568_00940 | Not Available | - | 902110 - 903258 | 42401.9 |
| udp-n-acetylglucosamine acyltransferase | SAMEA3710568_00941 | Not Available | - | 903258 - 904046 | 28081.7 |
| protein fabz | SAMEA3710568_00942 | Not Available | - | 904050 - 904505 | 17034.0 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMEA3710568_00943 | Not Available | - | 904610 - 905635 | 36026.7 |
| periplasmic chaperone | SAMEA3710568_00944 | Not Available | - | 905639 - 906124 | 17689.2 |
| outer membrane protein assembly factor yaet | SAMEA3710568_00945 | Not Available | - | 906246 - 908678 | 90557.5 |
| zinc metallopeptidase rsep | SAMEA3710568_00946 | Not Available | - | 908708 - 910060 | 49132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
