Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3710568_00915 | Not Available | + | 878983 - 879453 | 18268.2 |
| cyclic diguanylate phosphodiesterase (eal) domain protein | SAMEA3710568_00916 | Not Available | + | 879617 - 881167 | 58752.9 |
| conserved ybaa protein | SAMEA3710568_00917 | Not Available | - | 881209 - 881562 | 13318.9 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMEA3710568_00920 | Not Available | + | 881941 - 882252 | 11488.8 |
| d,d-heptose 1,7-bisphosphate phosphatase | SAMEA3710568_00921 | Not Available | - | 883245 - 883820 | 21295.4 |
| dl-methionine transporter atp-binding subunit | SAMEA3710568_00922 | Not Available | + | 884008 - 885039 | 37834.7 |
| dl-methionine transporter permease | SAMEA3710568_00923 | Not Available | + | 885032 - 885685 | 23204.6 |
| dl-methionine transporter substrate-binding subunit | SAMEA3710568_00924 | Not Available | + | 885725 - 886540 | 29419.2 |
| outer membrane lipoprotein | SAMEA3710568_00925 | Not Available | + | 886658 - 887062 | 14136.2 |
| protein yaeb | SAMEA3710568_00926 | Not Available | + | 887059 - 887766 | 26295.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
