Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | SAMEA3710568_00833 | Not Available | - | 790668 - 790955 | 10507.5 |
| protein fixc | SAMEA3710568_00834 | Not Available | - | 790952 - 792238 | 45656.5 |
| electron transfer flavoprotein fixb | SAMEA3710568_00835 | Not Available | - | 792439 - 793230 | 28173.6 |
| flavoprotein subunit | SAMEA3710568_00836 | Not Available | - | 793245 - 794015 | 27159.3 |
| l-carnitine/gamma-butyrobetaine antiporter | SAMEA3710568_00837 | Not Available | + | 794371 - 795885 | 56598.4 |
| crotonobetainyl-coa dehydrogenase | SAMEA3710568_00838 | Not Available | + | 795916 - 797058 | 42560.8 |
| crotonobetainyl-coa:carnitine coa-transferase | SAMEA3710568_00839 | Not Available | + | 797187 - 798404 | 45099.3 |
| crotonobetaine/carnitine-coa ligase | SAMEA3710568_00840 | Not Available | + | 798478 - 800031 | 58664.5 |
| carnitinyl-coa dehydratase | SAMEA3710568_00841 | Not Available | + | 800140 - 800925 | 28221.8 |
| carnitine operon protein caie | SAMEA3710568_00842 | Not Available | + | 800931 - 801521 | 21107.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
