Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional activator for leuabcd operon | SAMEA3710568_00800 | Not Available | - | 752579 - 753523 | 35686.7 |
| 2-isopropylmalate synthase | SAMEA3710568_00802 | Not Available | + | 754361 - 755932 | 57347.2 |
| 3-isopropylmalate dehydrogenase | SAMEA3710568_00803 | Not Available | + | 755932 - 757023 | 39517.2 |
| isopropylmalate isomerase large subunit | SAMEA3710568_00804 | Not Available | + | 757026 - 758426 | 49898.7 |
| isopropylmalate isomerase small subunit | SAMEA3710568_00805 | Not Available | + | 758437 - 759042 | 22504.7 |
| sugar efflux transporter subfamily | SAMEA3710568_00806 | Not Available | - | 759091 - 760269 | 42855.0 |
| transcriptional regulator sgrr | SAMEA3710568_00808 | Not Available | + | 760591 - 762246 | 63969.7 |
| putative abc-type thiamine transport system, periplasmic component | SAMEA3710568_00810 | Not Available | + | 762410 - 763393 | 36207.2 |
| thiamine transporter membrane protein | SAMEA3710568_00811 | Not Available | + | 763369 - 764979 | 59361.6 |
| thiamine transporter atp-binding subunit | SAMEA3710568_00812 | Not Available | + | 764963 - 765661 | 25026.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
