Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter substrate-binding protein hisj | SAMEA3710568_00760 | Not Available | + | 710054 - 710836 | 28464.9 |
| histidine abc transporter permease hisq | SAMEA3710568_00761 | Not Available | + | 710926 - 711612 | 24664.9 |
| histidine abc transporter permease hism | SAMEA3710568_00762 | Not Available | + | 711609 - 712325 | 26871.3 |
| histidine/lysine/arginine/ornithine transporter subunit | SAMEA3710568_00763 | Not Available | + | 712333 - 713106 | 28626.8 |
| putative transposase | SAMEA3710568_00764 | Not Available | + | 713303 - 714193 | 34209.6 |
| nad dependent epimerase/dehydratase family protein | SAMEA3710568_00765 | Not Available | - | 714241 - 715134 | 32729.8 |
| d-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase | SAMEA3710568_00766 | Not Available | - | 715155 - 715517 | 14082.8 |
| glutathione s-transferase | SAMEA3710568_00767 | Not Available | - | 715574 - 716221 | 24516.3 |
| glutathione s-transferase domain-containing protein | SAMEA3710568_00768 | Not Available | + | 716357 - 717001 | 24298.9 |
| phosphodiesterase | SAMEA3710568_00769 | Not Available | + | 717057 - 717608 | 19994.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
