Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine n-oxide reductase iii subunit torz | SAMEA3710568_03913 | Not Available | - | 3816160 - 3818589 | 88906.9 |
| trimethylamine n-oxide reductase iii, c-type cytochrome subunit tory | SAMEA3710568_03914 | Not Available | - | 3818614 - 3819714 | 40195.4 |
| copper homeostasis protein cutc | SAMEA3710568_03915 | Not Available | - | 3820102 - 3820848 | 26763.4 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_03916 | Not Available | - | 3820862 - 3821428 | 21238.2 |
| arginyl-trna synthetase | SAMEA3710568_03917 | Not Available | + | 3821644 - 3823377 | 64699.8 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_03918 | Not Available | + | 3823554 - 3824042 | 18876.1 |
| is629 orf2 | SAMEA3710568_03919 | Not Available | - | 3824262 - 3824468 | 7818.16 |
| protein of uncharacterised function (duf2686) | SAMEA3710568_03920 | Not Available | + | 3825011 - 3825841 | 30732.5 |
| dna-binding transcriptional repressor uxur | SAMEA3710568_03921 | Not Available | - | 3825982 - 3826707 | 27566.8 |
| uncharacterised protein | SAMEA3710568_03922 | Not Available | + | 3826754 - 3826948 | 6777.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
