Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain 2.1.18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aquatic; stratified aquatic environments; terrestrial |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
972375 bp
Thymine Count
973001 bp
Guanine Count
1840871 bp
Cytosine Count
1841773 bp
Genome Length
5628020 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | D4Q52_12700 | Not Available | + | 2739369 - 2740664 | 46877.0 |
| hypothetical protein | D4Q52_12705 | Not Available | + | 2740829 - 2741056 | 8231.05 |
| hypothetical protein | D4Q52_12710 | Not Available | - | 2741076 - 2741390 | 11279.6 |
| s1 family peptidase | D4Q52_12715 | Not Available | - | 2741634 - 2742392 | 25478.8 |
| Dna packaging/head-tail-connector | D4Q52_12720 | Not Available | + | 2742453 - 2743019 | 20024.4 |
| Hypothetical protein | D4Q52_12725 | Not Available | + | 2743016 - 2743336 | 11794.1 |
| Tail protein | D4Q52_12730 | Not Available | + | 2743513 - 2743923 | 14571.3 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | D4Q52_12735 | Not Available | + | 2743937 - 2744344 | 14213.9 |
| hypothetical protein | D4Q52_12740 | Not Available | - | 2744389 - 2744583 | 6327.97 |
| hypothetical protein | D4Q52_12745 | Not Available | - | 2744588 - 2745274 | 25387.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
