Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | strain YSC3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
933314 bp
Thymine Count
938056 bp
Guanine Count
1753147 bp
Cytosine Count
1747299 bp
Genome Length
5371816 bp
Protein-coding Genes
4905 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | RPYSC3_RS09550 | Not Available | + | 2064732 - 2065979 | 45306.9 |
| hypothetical protein | RPYSC3_RS09555 | Not Available | + | 2066251 - 2066499 | 8685.51 |
| hypothetical protein | RPYSC3_RS09560 | Not Available | - | 2066584 - 2066895 | 11486.1 |
| s1 family peptidase | RPYSC3_RS09565 | Not Available | - | 2067057 - 2067824 | 25508.6 |
| Dna packaging/head-tail-connector | RPYSC3_RS09570 | Not Available | + | 2067890 - 2068456 | 19924.1 |
| Head-tail connector complex protein | RPYSC3_RS09575 | Not Available | + | 2068453 - 2068773 | 11261.5 |
| Tail protein | RPYSC3_RS09580 | Not Available | + | 2068770 - 2069180 | 14727.5 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | RPYSC3_RS09585 | Not Available | + | 2069193 - 2069600 | 14302.0 |
| gene transfer agent family protein | RPYSC3_RS09590 | Not Available | + | 2069610 - 2069927 | 10552.5 |
| rcc01693 family protein | RPYSC3_RS09595 | Not Available | + | 2069924 - 2070127 | 7377.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
