Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | D1781_00295 | Not Available | - | 53371 - 54495 | 42143.2 |
| hypothetical protein | D1781_00300 | Not Available | - | 54817 - 55422 | 22299.7 |
| hypothetical protein | D1781_00305 | Not Available | + | 56033 - 56554 | 19536.3 |
| duf4190 domain-containing protein | D1781_00310 | Not Available | - | 56680 - 56964 | 9702.15 |
| hypothetical protein | D1781_00315 | Not Available | + | 57074 - 57562 | 16683.7 |
| hypothetical protein | D1781_00320 | Not Available | + | 60705 - 60890 | 6329.13 |
| hypothetical protein | D1781_00325 | Not Available | - | 61457 - 61615 | 5875.29 |
| hypothetical protein | D1781_00330 | Not Available | - | 61670 - 62350 | 23658.3 |
| hypothetical protein | D1781_00335 | Not Available | + | 62625 - 62939 | 11429.9 |
| sigma-70 family rna polymerase sigma factor | D1781_00340 | Not Available | + | 62964 - 63467 | 19331.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.