Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 267 - 383 | Not Available |
| pyridine nucleotide-disulfide oxidoreductase | D1781_00005 | Not Available | - | 350 - 1708 | 49311.7 |
| polyprenyl synthetase family protein | D1781_00010 | Not Available | - | 1757 - 2794 | 37192.3 |
| class i sam-dependent methyltransferase | D1781_00015 | Not Available | - | 2809 - 3534 | 25897.8 |
| 16s ribosomal rna | Not Available | Not Available | + | 3553 - 5078 | Not Available |
| isochorismate synthase | D1781_00020 | Not Available | + | 3575 - 4792 | 42612.5 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | D1781_00025 | Not Available | - | 4803 - 6458 | 57678.8 |
| pldc_n domain-containing protein | D1781_00030 | Not Available | - | 6472 - 6840 | 13332.0 |
| duf4229 domain-containing protein | D1781_00035 | Not Available | + | 6794 - 7273 | 16686.1 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | D1781_00040 | Not Available | - | 7237 - 8193 | 32961.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.