Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Amnibacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Amnibacterium |
| Species | Amnibacterium setariae |
| Strain | strain DD4a |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
456377 bp
Thymine Count
452969 bp
Guanine Count
1283414 bp
Cytosine Count
1289945 bp
Genome Length
3482706 bp
Protein-coding Genes
3370 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | D1781_00195 | Not Available | - | 33761 - 34894 | 41724.9 |
| hypothetical protein | D1781_00200 | Not Available | - | 34995 - 35708 | 26031.8 |
| nad-dependent epimerase/dehydratase family protein | D1781_00205 | Not Available | - | 36242 - 37291 | 37016.4 |
| nad-dependent epimerase/dehydratase family protein | D1781_00210 | Not Available | - | 37318 - 38163 | 30021.8 |
| tetr/acrr family transcriptional regulator | D1781_00215 | Not Available | + | 38299 - 38814 | 19166.8 |
| hypothetical protein | D1781_00220 | Not Available | - | 38985 - 39398 | 15081.7 |
| class ii fumarate hydratase | D1781_00225 | Not Available | - | 39592 - 41046 | 51711.5 |
| nad-dependent malic enzyme | D1781_00230 | Not Available | - | 41074 - 42720 | 59281.1 |
| nad(p)-dependent oxidoreductase | D1781_00235 | Not Available | - | 42864 - 43691 | 30299.5 |
| sdr family oxidoreductase | D1781_00240 | Not Available | - | 43598 - 44446 | 31041.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.