Phocaeicola vulgatus strain AF14-8

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola vulgatus strain AF14-8 is a Gram-positive, rod-shaped bacterium that predominantly exists in a single-cell arrangement and is classified as an anaerobe, indicating its metabolic processes occur in the absence of oxygen. This strain is host-associated, suggesting a specific relationship with a particular host organism, though the nature of this association is not detailed in the available traits. As a member of the genus Phocaeicola, strain AF14-8 may play a role in the microbial ecosystems within its host, contributing to various physiological processes, including fermentation and nutrient absorption. The anaerobic nature of this microbe implies that it may thrive in environments rich in organic substrates, where it can utilize fermentation pathways for energy generation. Understanding the specific interactions of Phocaeicola vulgatus strain AF14-8 within its host environment could provide insights into its potential functions in health and disease, as well as its role in maintaining microbial diversity. The presence of this strain highlights the importance of anaerobic bacteria in host-associated communities, where they may fulfill essential roles in metabolic processes and contribute to the overall microbiome stability. Further research into the ecological impact of this strain could shed light on its contributions to the host's health and the dynamics of its associated microbial community.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
Strainstrain AF14-8

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Phocaeicola vulgatus strain AF14-8
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phocaeicola vulgatus strain AF14-8


Gene Summary

Adenine Count

1603409 bp

Thymine Count

1565032 bp

Guanine Count

1142566 bp

Cytosine Count

1200246 bp

Genome Length

5511576 bp

Protein-coding Genes

4648 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative tail proteinDWW27_14635Not Available-3367442 - 3371560152909.0
Putative phage tail proteinDWW27_14640Not Available-3371545 - 337275344907.6
Hypothetical proteinDWW27_14645Not Available-3372755 - 337326419353.4
Putative tape measure domain proteinDWW27_14650Not Available-3373291 - 3377511155512.0
hypothetical proteinDWW27_14655Not Available-3377720 - 337828321143.9
hypothetical proteinDWW27_14660Not Available-3378355 - 337885517390.8
hypothetical proteinDWW27_14665Not Available-3378868 - 337927815384.6
Hypothetical proteinDWW27_14670Not Available-3379275 - 337974217061.5
Hypothetical proteinDWW27_14675Not Available-3379733 - 338007412637.0
Hypothetical proteinDWW27_14680Not Available-3380068 - 338038511888.3

Displaying genes 1 – 10 of 4771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites