Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | CL09T03C04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1433763 bp
Thymine Count
1416605 bp
Guanine Count
1011813 bp
Cytosine Count
1038238 bp
Genome Length
4900419 bp
Protein-coding Genes
4012 genes
Non-Coding Genes
130 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Phage portal protein | HMPREF1058_01898 | Not Available | - | 2331660 - 2333084 | 54756.3 |
| Terminase large subunit | HMPREF1058_01899 | Not Available | - | 2333096 - 2334493 | 53825.1 |
| hypothetical protein | HMPREF1058_01900 | Not Available | - | 2334510 - 2334977 | 17616.2 |
| hypothetical protein | HMPREF1058_01901 | Not Available | - | 2335081 - 2335320 | 9455.78 |
| hypothetical protein | HMPREF1058_01902 | Not Available | - | 2335357 - 2335968 | 22109.4 |
| Parb-like nuclease domain containing protein | HMPREF1058_01903 | Not Available | - | 2335946 - 2337064 | 43141.9 |
| hypothetical protein | HMPREF1058_01904 | Not Available | - | 2337066 - 2337428 | 13779.2 |
| Hypothetical protein | HMPREF1058_01905 | Not Available | - | 2337503 - 2337943 | 17057.7 |
| hypothetical protein | HMPREF1058_01906 | Not Available | - | 2337940 - 2338332 | 15052.1 |
| Exonuclease | HMPREF1058_01907 | Not Available | - | 2338337 - 2338909 | 21681.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

