Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_03025 | Not Available | Positive | 770025 - 771584 | 60866.6 |
| site-specific integrase | DW150_03030 | Not Available | Negative | 771643 - 772872 | 47691.4 |
| Trna-asp | Not Available | Not Available | Positive | 773113 - 773189 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 773220 - 773296 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 773327 - 773403 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 773434 - 773510 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 773541 - 773617 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 773648 - 773724 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 773755 - 773831 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 773862 - 773938 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

