Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_21890 | Not Available | Negative | 5214881 - 5215066 | 7214.85 |
| hypothetical protein | DW150_21895 | Not Available | Negative | 5215123 - 5215731 | 23693.5 |
| rna methyltransferase | DW150_21900 | Not Available | Negative | 5215831 - 5216637 | 29104.6 |
| zn-dependent alcohol dehydrogenase | DW150_21905 | Not Available | Negative | 5216673 - 5217719 | 38314.1 |
| hsp20/alpha crystallin family protein | DW150_21910 | Not Available | Positive | 5218047 - 5218484 | 16906.9 |
| gtra family protein | DW150_21915 | Not Available | Positive | 5219106 - 5219495 | 14986.9 |
| sdr family nad(p)-dependent oxidoreductase | DW150_21920 | Not Available | Positive | 5219512 - 5220387 | 33178.4 |
| gnat family n-acetyltransferase | DW150_21925 | Not Available | Positive | 5220432 - 5221373 | 36088.7 |
| hypothetical protein | DW150_21930 | Not Available | Positive | 5221477 - 5224203 | 98727.5 |
| hypothetical protein | DW150_21935 | Not Available | Negative | 5224443 - 5225558 | 41980.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


