Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW150_17150 | Not Available | Negative | 4083039 - 4083944 | 35100.1 |
| 4fe-4s cluster-binding domain-containing protein | DW150_17155 | Not Available | Negative | 4084069 - 4084902 | 31376.2 |
| pyruvate formate lyase | DW150_17160 | Not Available | Negative | 4084889 - 4086931 | 78228.5 |
| flippase | DW150_17165 | Not Available | Negative | 4086928 - 4088373 | 54046.6 |
| transcriptional regulator | DW150_17170 | Not Available | Negative | 4088462 - 4089295 | 32255.6 |
| site-specific integrase | DW150_17175 | Not Available | Negative | 4089911 - 4091113 | 46810.8 |
| abc transporter atp-binding protein | DW150_17180 | Not Available | Negative | 4091197 - 4093062 | 72122.0 |
| duf3805 domain-containing protein | DW150_17185 | Not Available | Negative | 4093070 - 4093903 | 31690.3 |
| lactoylglutathione lyase | DW150_17190 | Not Available | Negative | 4093946 - 4094323 | 14724.3 |
| mbl fold metallo-hydrolase | DW150_17195 | Not Available | Negative | 4094341 - 4095132 | 30363.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

