Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3987 domain-containing protein | DW150_16495 | Not Available | Positive | 3967148 - 3969091 | 71616.3 |
| duf4248 domain-containing protein | DW150_16500 | Not Available | Positive | 3969109 - 3969333 | 8370.25 |
| dna-binding protein | DW150_16505 | Not Available | Positive | 3969616 - 3970155 | 19200.7 |
| n-acetylmuramoyl-l-alanine amidase | DW150_16510 | Not Available | Positive | 3970466 - 3970984 | 19702.8 |
| undecaprenyl-phosphate glucose phosphotransferase | DW150_16520 | Not Available | Negative | 3971412 - 3972827 | 54712.3 |
| dtdp-glucose 4,6-dehydratase | DW150_16525 | Not Available | Negative | 3972889 - 3973965 | 41496.0 |
| dtdp-4-dehydrorhamnose reductase | DW150_16530 | Not Available | Negative | 3973990 - 3974850 | 32219.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DW150_16535 | Not Available | Negative | 3974850 - 3975422 | 21735.8 |
| glucose-1-phosphate thymidylyltransferase | DW150_16540 | Not Available | Negative | 3975426 - 3976331 | 33625.5 |
| hypothetical protein | DW150_16545 | Not Available | Negative | 3976353 - 3977162 | 31213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

