Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_16345 | Not Available | Positive | 3928016 - 3928513 | 19326.7 |
| hypothetical protein | DW150_16350 | Not Available | Positive | 3928510 - 3928956 | 17559.2 |
| pkd domain-containing protein | DW150_16355 | Not Available | Positive | 3928967 - 3929908 | 35932.8 |
| hypothetical protein | DW150_16360 | Not Available | Positive | 3929905 - 3932253 | 89843.4 |
| hypothetical protein | DW150_16365 | Not Available | Positive | 3932259 - 3933062 | 30948.4 |
| type vi secretion system needle protein hcp | DW150_16370 | Not Available | Positive | 3933576 - 3933971 | 14749.5 |
| type iv secretion protein rhs | DW150_16375 | Not Available | Positive | 3934082 - 3935845 | 63204.2 |
| hypothetical protein | DW150_16380 | Not Available | Positive | 3935885 - 3937228 | 51215.6 |
| hypothetical protein | DW150_16385 | Not Available | Positive | 3937194 - 3937481 | 11096.7 |
| type iv secretion protein rhs | DW150_16390 | Not Available | Positive | 3937500 - 3940300 | 102175.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

