Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4375 domain-containing protein | DW150_16045 | Not Available | Positive | 3872368 - 3872877 | 19600.1 |
| sodium:glutamate symporter | DW150_16050 | Not Available | Negative | 3873041 - 3874420 | 49817.1 |
| hypothetical protein | DW150_16055 | Not Available | Negative | 3874636 - 3875250 | 23042.4 |
| hypothetical protein | DW150_16060 | Not Available | Positive | 3875597 - 3876352 | 27674.8 |
| hypothetical protein | DW150_16065 | Not Available | Negative | 3876629 - 3876751 | 4257.97 |
| hypothetical protein | DW150_16070 | Not Available | Negative | 3877056 - 3878762 | 63739.8 |
| fimbrillin family protein | DW150_16075 | Not Available | Negative | 3878828 - 3879898 | 39300.6 |
| fimbrillin family protein | DW150_16080 | Not Available | Negative | 3880028 - 3881167 | 42215.1 |
| duf5119 domain-containing protein | DW150_16085 | Not Available | Negative | 3881211 - 3882218 | 37829.5 |
| hypothetical protein | DW150_16090 | Not Available | Negative | 3882215 - 3882553 | 12929.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

