Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DW150_06240 | Not Available | Negative | 1579534 - 1580913 | 51485.9 |
| acrb/acrd/acrf family protein | DW150_06245 | Not Available | Negative | 1580946 - 1584071 | 115952.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW150_06250 | Not Available | Negative | 1584071 - 1585138 | 39289.3 |
| arac family transcriptional regulator | DW150_06255 | Not Available | Positive | 1585315 - 1586193 | 34369.8 |
| tigr02757 family protein | DW150_06260 | Not Available | Positive | 1586259 - 1587023 | 29909.7 |
| glucosamine-6-phosphate deaminase | DW150_06265 | Not Available | Negative | 1587199 - 1589187 | 74771.3 |
| glucosamine-6-phosphate deaminase | DW150_06270 | Not Available | Negative | 1589191 - 1589982 | 29021.6 |
| mfs transporter | DW150_06275 | Not Available | Negative | 1590028 - 1591263 | 44685.5 |
| n-acylglucosamine 2-epimerase | DW150_06280 | Not Available | Negative | 1591282 - 1592478 | 46187.0 |
| n-acetylneuraminate lyase | DW150_06285 | Not Available | Negative | 1592491 - 1593405 | 34026.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

