Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenical pump-driving atpase | DW150_06185 | Not Available | Positive | 1571208 - 1572917 | 62754.7 |
| arsenical-resistance protein | DW150_06190 | Not Available | Positive | 1573050 - 1574144 | 40208.9 |
| hypothetical protein | DW150_06200 | Not Available | Negative | 1574403 - 1574981 | 22991.0 |
| sigma-70 family rna polymerase sigma factor | DW150_06205 | Not Available | Negative | 1574994 - 1575467 | 19047.0 |
| hypothetical protein | DW150_06210 | Not Available | Negative | 1575620 - 1576291 | 25551.6 |
| hypothetical protein | DW150_06215 | Not Available | Positive | 1576384 - 1576575 | 7282.91 |
| arac family transcriptional regulator | DW150_06220 | Not Available | Positive | 1576688 - 1577533 | 32753.3 |
| sugar o-acetyltransferase | DW150_06225 | Not Available | Positive | 1577772 - 1578338 | 20354.8 |
| hypothetical protein | DW150_06230 | Not Available | Positive | 1578529 - 1578648 | 4138.87 |
| dna-binding protein | DW150_06235 | Not Available | Positive | 1578614 - 1579318 | 26967.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

