Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW150_05855 | Not Available | Positive | 1487761 - 1488918 | 44553.6 |
| hypothetical protein | DW150_05860 | Not Available | Positive | 1488977 - 1489627 | 24878.8 |
| rhodanese-like domain-containing protein | DW150_05865 | Not Available | Positive | 1489657 - 1490055 | 15066.1 |
| acetylornithine carbamoyltransferase | DW150_05870 | Not Available | Negative | 1490444 - 1491409 | 36475.8 |
| glutamate-5-semialdehyde dehydrogenase | DW150_05875 | Not Available | Negative | 1491429 - 1492682 | 45546.8 |
| glutamate 5-kinase | DW150_05880 | Not Available | Negative | 1492720 - 1493802 | 39534.9 |
| cof-type had-iib family hydrolase | DW150_05885 | Not Available | Positive | 1493961 - 1494743 | 28794.6 |
| glycoside hydrolase family 92 protein | DW150_05890 | Not Available | Positive | 1494947 - 1497139 | 82220.2 |
| atp-binding protein | DW150_05895 | Not Available | Positive | 1497457 - 1498587 | 43836.0 |
| hypothetical protein | DW150_05900 | Not Available | Positive | 1498609 - 1499250 | 24550.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

