Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM13-21 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | DW150_05230 | Not Available | Positive | 1297436 - 1298671 | 47212.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DW150_05235 | Not Available | Positive | 1298804 - 1299844 | 36860.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DW150_05240 | Not Available | Positive | 1299850 - 1301235 | 51195.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW150_05245 | Not Available | Positive | 1301252 - 1302019 | 27767.7 |
| hypothetical protein | DW150_05250 | Not Available | Positive | 1302083 - 1302646 | 21611.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DW150_05255 | Not Available | Positive | 1302698 - 1303600 | 35088.3 |
| alpha-l-fucosidase | DW150_05260 | Not Available | Positive | 1303609 - 1305648 | 76842.4 |
| hypothetical protein | DW150_05265 | Not Available | Negative | 1305826 - 1306599 | 29786.5 |
| tlpa family protein disulfide reductase | DW150_05270 | Not Available | Negative | 1306721 - 1308829 | 80241.7 |
| thiol:disulfide interchange protein | DW150_05275 | Not Available | Negative | 1308852 - 1310042 | 44874.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

