Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter chinensis |
| Strain | strain JDX94 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1700063 bp
Thymine Count
1703139 bp
Guanine Count
1035986 bp
Cytosine Count
1008972 bp
Genome Length
5448160 bp
Protein-coding Genes
4613 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is256 family transposase | DU508_00005 | Not Available | + | 1 - 176 | 6556.15 |
| 5s ribosomal rna | Not Available | Not Available | + | 6 - 117 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 7 - 118 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 249 - 3124 | Not Available |
| hypothetical protein | DU508_00010 | Not Available | - | 212 - 526 | 11643.4 |
| hypothetical protein | DU508_00015 | Not Available | - | 528 - 773 | 9251.59 |
| hypothetical protein | DU508_00020 | Not Available | + | 969 - 1289 | 12101.1 |
| hypothetical protein | DU508_00025 | Not Available | + | 1286 - 2335 | 37999.6 |
| hypothetical protein | DU508_00030 | Not Available | + | 2338 - 2784 | 17792.3 |
| hypothetical protein | DU508_00035 | Not Available | + | 3021 - 3224 | 7390.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.