Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 4080815 - 4080827 | Not Available |
| Pyocin activator prtn family protein | CTM90_18155 | Not Available | + | 4081200 - 4081493 | 10980.4 |
| hypothetical protein | CTM90_18160 | Not Available | + | 4081497 - 4081784 | 11369.7 |
| hypothetical protein | CTM90_18165 | Not Available | + | 4081973 - 4082863 | 34029.1 |
| hypothetical protein | CTM90_18170 | Not Available | + | 4082860 - 4083165 | 11448.8 |
| hypothetical protein | CTM90_18175 | Not Available | + | 4083303 - 4084010 | 27037.0 |
| Hipa toxin | CTM90_18180 | Not Available | + | 4084021 - 4084461 | 17129.7 |
| Hypothetical protein | CTM90_18185 | Not Available | + | 4084463 - 4085071 | 23433.8 |
| Putative primase-helicase | CTM90_18190 | Not Available | - | 4085146 - 4086165 | 37894.5 |
| Site-specific integrase | CTM90_18195 | Not Available | - | 4086190 - 4087227 | 39484.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.