Yersinia bercovieri strain SCPM-O-B-7607

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia bercovieri strain SCPM-O-B-7607 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain exhibits facultative anaerobic respiration, allowing it to thrive in both aerobic and anaerobic environments. It is classified as a heterotroph, indicating that it derives its energy from organic compounds, which may contribute to its adaptability in various habitats. The optimal growth temperature for this strain is 28.0°C, suggesting a preference for mesophilic conditions. Yersinia bercovieri strain SCPM-O-B-7607 has been isolated from multiple environments, highlighting its ecological versatility. This adaptability may reflect its capacity to exploit diverse organic matter sources, which can be crucial for survival in fluctuating ecological niches. Understanding the metabolic capabilities and habitat preferences of this strain can offer insights into its role within microbial communities and its potential interactions with other microorganisms in various ecosystems. This adaptability may also suggest a broader ecological significance, particularly in environments where organic matter is abundant and diverse, emphasizing the importance of heterotrophic microbes in nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia bercovieri
Strainstrain SCPM-O-B-7607

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Yersinia bercovieri strain SCPM-O-B-7607
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Yersinia bercovieri strain SCPM-O-B-7607


Gene Summary

Adenine Count

1106748 bp

Thymine Count

1091650 bp

Guanine Count

1040798 bp

Cytosine Count

1079584 bp

Genome Length

4318780 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Glycation-binding protein, predicted protease/chaperoneCS533_02490Not Available-578095 - 57910835816.2
30s ribosomal protein s21CS533_02495Not Available+579483 - 5796988500.42
Dna primaseCS533_02500Not Available+579834 - 58158265812.8
Rna polymerase sigma factorCS533_02505Not Available+581740 - 58357870145.2
Trna,type:met,anti_codon:cat;Not AvailableNot Available+583787 - 583863Not Available
AttlNot AvailableNot Available+583818 - 583850Not Available
PagCS533_02515Not Available-584009 - 5842278196.81
Tail proteinCS533_02520Not Available-584334 - 58549742107.4
Tail proteinCS533_02525Not Available-585494 - 58597917611.5
Tail tape measure proteinCS533_02530Not Available-585982 - 58839384341.5

Displaying genes 1 – 10 of 3909 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites