Citrobacter freundii strain CF_324

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain CF_324 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism. This strain does not undergo sporulation and is commonly found in diverse environments, including hospital sewage, the intestinal tract of various organisms, sewage systems, soil, and surface waters. As a facultative anaerobe, C. freundii strain CF_324 possesses the ability to thrive in both aerobic and anaerobic conditions, allowing it to adapt to a variety of ecological niches. Its presence in hospital sewage suggests a potential role in the microbial community dynamics of waste treatment systems, where it may contribute to nutrient cycling and organic matter degradation. The strain's adaptability to different environments, coupled with its nonsporulating nature, indicates that it may rely on rapid growth and reproduction in favorable conditions rather than forming spores to withstand adverse environments. This trait could facilitate its persistence in fluctuating habitats, such as sewage and soil, where nutrient availability and oxygen levels can vary significantly. Understanding the ecological role of Citrobacter freundii strain CF_324 may provide insights into microbial interactions in contaminated environments and inform strategies for managing microbial communities in wastewater treatment processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
Strainstrain CF_324

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii strain CF_324
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii strain CF_324


Gene Summary

Adenine Count

11677 bp

Thymine Count

12462 bp

Guanine Count

11780 bp

Cytosine Count

11248 bp

Genome Length

47167 bp

Protein-coding Genes

47 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mobq family relaxaseEGK69_RS27155Not AvailableNegative175 - 139546879.9
hypothetical proteinEGK69_RS27160Not AvailablePositive1691 - 208615807.9
conjugal transfer protein tradEGK69_RS27165Not AvailablePositive2076 - 235410500.7
hypothetical proteinEGK69_RS27170Not AvailablePositive2487 - 275310423.6
sigma factor-like helix-turn-helix dna-binding proteinEGK69_RS27175Not AvailableNegative2768 - 304010525.7
replication initiation proteinEGK69_RS27180Not AvailableNegative3044 - 390433657.9
type iv secretory system conjugative dna transfer family proteinEGK69_RS26890Not AvailableNegative154 - 206170346.7
h-ns family nucleoid-associated regulatory proteinEGK69_RS26895Not AvailableNegative2770 - 316215007.9
type ia dna topoisomeraseEGK69_RS26900Not AvailableNegative3159 - 536080813.1
hypothetical proteinEGK69_RS26905Not AvailableNegative5643 - 597812580.7

Displaying genes 1 – 10 of 349 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infections in animalsCausesPMC6885840
Infections of the urinary and respiratory tracts in humansCausesPMC6885840
Respiratory tract and wound infections in horsesCausesPMC6885840
Respiratory tract infections in dogsCausesPMC6885840
Pleuritis and urinary tract infections in catsCausesPMC6885840
Bacterial infectionsCausesPMC7578172
Opportunistic infectionsCausesPMC12838003

Displaying health effects 1 – 7 of 7 in total