Agrobacterium tumefaciens strain 186

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain 186 is a Gram-negative, rod-shaped bacterium that thrives optimally at 25.0°C and exhibits aerobic metabolic characteristics. This strain is part of a diverse genus known for its ability to inhabit multiple environments, demonstrating considerable ecological versatility. As a member of the Agrobacterium genus, strain 186 is particularly notable for its role in plant-microbe interactions, although specific pathogenicity traits are not detailed in the provided data. It is commonly found in soil and plant rhizospheres, where it may contribute to various ecological processes. The aerobic nature of strain 186 suggests that it utilizes oxygen for respiration, which may influence its distribution in environments with varying oxygen availability. Furthermore, the optimal growth temperature of 25.0°C indicates a preference for moderate conditions, which aligns with the typical habitats of many soil-dwelling bacteria. Understanding the traits of Agrobacterium tumefaciens strain 186 can provide insights into its potential roles in agricultural and ecological contexts, particularly regarding its interactions with plant hosts and its contribution to nutrient cycling. This highlights the importance of studying such strains to explore their utility in biotechnology and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain 186

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain 186
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Viridiplantae, Triticum aestivum, Solanum tuberosum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain 186


Gene Summary

Adenine Count

447018 bp

Thymine Count

447468 bp

Guanine Count

659232 bp

Cytosine Count

658668 bp

Genome Length

2212386 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Terminase large subunitCG010_RS02985Not AvailablePositive606393 - 60765245827.2
Hypothetical proteinCG010_RS02990Not AvailablePositive608099 - 60873723569.3
dabb family proteinCG010_RS02995Not AvailablePositive608797 - 60910511393.5
Portal proteinCG010_RS03000Not AvailablePositive609360 - 61052642459.8
duf6107 family proteinCG010_RS03005Not AvailablePositive610721 - 61104110982.5
Putative prohead proteaseCG010_RS03010Not AvailablePositive611070 - 61167822542.9
Major capsid proteinCG010_RS03015Not AvailablePositive611709 - 61297745439.9
Dna packaging/head-tail-connectorCG010_RS03020Not AvailablePositive613167 - 61373620746.3
Head closure proteinCG010_RS03025Not AvailablePositive613740 - 61407512608.0
Tail proteinCG010_RS03030Not AvailablePositive614072 - 61446714214.2

Displaying genes 1 – 10 of 5441 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
TumorsCausesPMC177831
Crown gall diseaseCausesPMC2241609
Crown gall diseaseCausesPMC2653234
Crown gall diseaseCausesPMC11575935
Crown and cane gall symptomsCausesPMC12602688
Crown and cane gallsCausesPMC12602688
Crown gall diseaseCausesPMC9343901
Crown gallCausesPMC12030312
Crown-gall diseaseCausesPMC7248198
Crown gall tumorsCausesPMC8087989

Displaying health effects 1 – 10 of 10 in total