Staphylococcus epidermidis strain HD43

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus epidermidis strain HD43 is a Gram-positive coccus that typically arranges itself in clusters or singles. This strain is a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. It exhibits optimal growth at a temperature of 30.0°C, which suggests a preference for conditions that may be found in various host-associated environments. As a member of the Staphylococcus genus, S. epidermidis is commonly associated with human skin and mucous membranes, where it plays a role in the normal microbiota. While it is primarily regarded as a commensal organism, its adaptability to different oxygen levels and temperature indicates its potential resilience in diverse ecological niches within the host. The cluster formation of S. epidermidis strain HD43 may contribute to its ability to form biofilms, particularly on implanted medical devices, which is a characteristic feature of many strains within this species. This trait underscores the importance of understanding the ecological role of S. epidermidis in both health and disease contexts, as it may serve as a protective agent for the host while also posing challenges in clinical settings. Overall, the unique growth characteristics and habitat preferences of S. epidermidis strain HD43 highlight its significance in the complex interplay between human hosts and their resident microbial communities.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus epidermidis
Strainstrain HD43

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Staphylococcus epidermidis strain HD43
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementClusters - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus epidermidis strain HD43


Gene Summary

Adenine Count

835113 bp

Thymine Count

811611 bp

Guanine Count

391117 bp

Cytosine Count

384349 bp

Genome Length

2424890 bp

Protein-coding Genes

2222 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+2317819 - 2317830Not Available
GepaFH487_RS12255Not Available-2332367 - 233310128691.3
Hypothetical proteinFH487_RS11495Not Available-2333115 - 233376526128.3
Orf009FH487_RS11500Not Available-2333938 - 233443218677.2
Orf007FH487_RS11505Not Available-2334492 - 233517827124.7
Orf010FH487_RS11510Not Available-2335198 - 233573121306.4
Orf015FH487_RS11515Not Available-2335744 - 233608213318.0
Orf008FH487_RS11520Not Available-2336424 - 233706524539.9
Orf013FH487_RS11525Not Available-2337079 - 233744414457.4
Orf001FH487_RS11530Not Available-2337774 - 233948365421.5

Displaying genes 1 – 10 of 2309 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites