Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | strain SJTF8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
35708 bp
Thymine Count
35961 bp
Guanine Count
60664 bp
Cytosine Count
59578 bp
Genome Length
191911 bp
Protein-coding Genes
191 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system dna-binding domain-containing protein | EBF16_RS02665 | Not Available | - | 333 - 2663 | 86585.9 |
| ribbon-helix-helix protein, copg family | EBF16_RS02670 | Not Available | - | 2650 - 2940 | 10825.9 |
| hypothetical protein | EBF16_RS02675 | Not Available | + | 3395 - 3622 | 8302.99 |
| hypothetical protein | EBF16_RS02680 | Not Available | - | 3748 - 4059 | 11525.5 |
| duf2493 domain-containing protein | EBF16_RS02685 | Not Available | - | 4499 - 5542 | 38530.6 |
| duf6088 family protein | EBF16_RS02690 | Not Available | + | 6223 - 6879 | 23161.2 |
| hypothetical protein | EBF16_RS02695 | Not Available | + | 6905 - 7159 | 9258.39 |
| type ii toxin-antitoxin system pard family antitoxin | EBF16_RS02700 | Not Available | + | 7291 - 7530 | 8801.28 |
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS02705 | Not Available | + | 7527 - 7865 | 12429.9 |
| abrb/maze/spovt family dna-binding domain-containing protein | EBF16_RS02710 | Not Available | + | 7862 - 8038 | 6543.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
