Prevotella denticola strain KCOM 1525

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Prevotella

Description

Prevotella denticola strain KCOM 1525 is a Gram-negative bacterium primarily associated with the oral cavity, specifically inhabiting the environment of human teeth. This microbe is part of the diverse microbiota found in dental plaque, which plays a critical role in maintaining oral health and influencing disease processes. The Gram-negative nature of Prevotella denticola suggests that it possesses a complex cell wall structure characterized by an outer membrane containing lipopolysaccharides, which may contribute to its interactions within the oral microbiome. As a member of the Prevotella genus, P. denticola is known for its ability to metabolize a variety of carbohydrates and proteins, potentially aiding in the breakdown of organic matter in its habitat. Its presence in dental biofilms highlights its significance in oral ecology, where it may participate in competitive interactions with other microbial species. Understanding the traits of P. denticola strain KCOM 1525 can provide insights into the dynamics of microbial communities in the oral cavity, particularly in relation to dental health and disease. The specific adaptation of P. denticola to tooth surfaces underscores its potential role in the complex interplay between host and microbiota, as the health of the oral environment can significantly influence overall systemic health. This emphasizes the importance of studying such microbes to better understand their contributions to both oral and systemic conditions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusPrevotella
SpeciesPrevotella denticola
Strainstrain KCOM 1525

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitattooth
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella denticola strain KCOM 1525


Gene Summary

Adenine Count

455662 bp

Thymine Count

470927 bp

Guanine Count

464152 bp

Cytosine Count

455445 bp

Genome Length

1846186 bp

Protein-coding Genes

1416 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
abc transporter substrate-binding proteinDYJ25_RS00010Not Available-384 - 176652409.7
gliding motility-associated c-terminal domain-containing proteinDYJ25_RS00015Not Available+1989 - 267525658.1
excinuclease abc subunit uvraDYJ25_RS00020Not Available+2757 - 5585105945.0
translational gtpase typaDYJ25_RS00030Not Available-6136 - 793867340.0
30s ribosomal protein s15DYJ25_RS00035Not Available+8142 - 841710718.9
c10 family peptidaseDYJ25_RS00040Not Available-8729 - 1116192048.7
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDYJ25_RS00045Not Available-11274 - 1168415823.0
s-adenosylmethionine:trna ribosyltransferase-isomeraseDYJ25_RS00050Not Available-11686 - 1287044791.4
trna pseudouridine(55) synthase trubDYJ25_RS00055Not Available-12888 - 1358926329.7
undecaprenyl-diphosphate phosphataseDYJ25_RS00060Not Available-13614 - 1447431831.1

Displaying genes 1 – 10 of 1464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da

Displaying 1–10 of 83 metabolites