Xanthomonas campestris pv. campestris strain Xcc8004_Xcc2

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas campestris pv. campestris strain Xcc8004_Xcc2 is a Gram-negative, rod-shaped bacterium that thrives in host-associated environments, exhibiting optimal growth at 25.0 °C. As an aerobe, this strain requires oxygen for its metabolic processes, which is a characteristic feature of many plant-associated bacteria. The organism's Gram-negative cell wall structure is indicative of its potential interactions with plant tissues, possibly involving complex mechanisms of adhesion and colonization. The rod shape of Xcc8004_Xcc2 may facilitate movement and biofilm formation, which are critical factors for survival in host-associated habitats. Given its optimal growth temperature, Xcc8004_Xcc2 may be well-adapted to temperate climates where host plants are prevalent. Understanding the physiological traits of this strain could provide insights into its role within plant microbiomes, particularly in terms of nutrient cycling and plant health. Additionally, the aerobe nature of this bacterium suggests it may play a role in the aerobic decomposition of organic matter in its ecological niche, contributing to the overall dynamics of microbial communities associated with host plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas campestris
Strainpv. campestris strain Xcc8004_Xcc2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthomonas campestris pv. campestris strain Xcc8004_Xcc2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas campestris pv. campestris strain Xcc8004_Xcc2


Gene Summary

Adenine Count

902637 bp

Thymine Count

905595 bp

Guanine Count

1672835 bp

Cytosine Count

1680108 bp

Genome Length

5161275 bp

Protein-coding Genes

4272 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail completion proteinDFG54_RS20610Not Available-4566892 - 45670114366.22
Is1478 transposaseDFG54_RS20615Not Available-4567034 - 456840151779.1
AttlNot AvailableNot Available+4991702 - 4991713Not Available
integrase core domain-containing proteinDFG54_RS22515Not Available+5005896 - 50061539926.82
hypothetical proteinDFG54_RS23970Not Available-5006153 - 500643410416.7
hypothetical proteinDFG54_RS22525Not Available-5006550 - 50068139383.19
Transcriptional regulatorDFG54_RS22530Not Available+5006991 - 50072369340.32
rlua family pseudouridine synthaseDFG54_RS22535Not Available-5007261 - 500815733600.4
Putative restriction endonuclaseDFG54_RS22540Not Available+5008518 - 500935430528.0
Is1481 transposaseDFG54_RS22545Not Available+5009484 - 501069845705.0

Displaying genes 61 – 70 of 4486 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites