Dickeya fangzhongdai strain DSM 101947

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya fangzhongdai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya fangzhongdai strain DSM 101947

Accession NumberNZ_CP025003.1

Gene Summary

Adenine Count

1086499 bp

Thymine Count

1087221 bp

Guanine Count

1423061 bp

Cytosine Count

1430382 bp

Genome Length

5027163 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
bifunctional aspartate kinase/homoserine dehydrogenase iCVE23_RS19265Not Available-4305680 - 430813688822.0
trna/rrna methyltransferaseCVE23_RS19270Not Available-4308570 - 430927125629.8
two-component system response regulator arcaCVE23_RS19275Not Available+4309836 - 431055227171.5
protein creaCVE23_RS19280Not Available-4310657 - 431113016919.6
mdr efflux pump acrab transcriptional activator robaCVE23_RS19285Not Available+4311336 - 431220233253.9
2,3-diphosphoglycerate-dependent phosphoglycerate mutase gpmbCVE23_RS19290Not Available-4312199 - 431284924038.1
inosine/xanthosine triphosphataseCVE23_RS19295Not Available+4312901 - 431344019407.2
trp operon repressorCVE23_RS19300Not Available-4313455 - 431378712360.9
murein transglycosylaseCVE23_RS19305Not Available-4313976 - 431590773548.1
energy-dependent translational throttle protein ettaCVE23_RS19310Not Available+4316363 - 431802762286.2

Displaying genes 3801 – 3810 of 4446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001650N-acetyl-9-O-acetylneuraminateC13H20NO10Chemical structure of N-acetyl-9-O-acetylneuraminateNot available
Average350.301Da
Monoisotopic350.109269428Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002396scyllo-inosineC6H10O6Chemical structure of scyllo-inosineNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–5 of 5 metabolites