Dickeya fangzhongdai strain DSM 101947

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya fangzhongdai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya fangzhongdai strain DSM 101947

Accession NumberNZ_CP025003.1

Gene Summary

Adenine Count

1086499 bp

Thymine Count

1087221 bp

Guanine Count

1423061 bp

Cytosine Count

1430382 bp

Genome Length

5027163 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf1107 domain-containing proteinCVE23_RS17915Not Available-3998215 - 39984218006.07
3'(2'),5'-bisphosphate nucleotidase cysqCVE23_RS17920Not Available-3998839 - 399957927191.2
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidaseCVE23_RS17925Not Available+3999814 - 400176371259.5
iron-sulfur cluster repair protein ytfeCVE23_RS17930Not Available+4001905 - 400257025174.2
duf2502 domain-containing proteinCVE23_RS17935Not Available-4002675 - 400303113086.6
fkbp-type peptidyl-prolyl cis-trans isomeraseCVE23_RS17940Not Available-4003326 - 400394622294.5
lysm-like peptidoglycan-binding domain-containing proteinCVE23_RS17945Not Available+4004172 - 400487926823.1
duf488 domain-containing proteinCVE23_RS17950Not Available-4004863 - 400523714525.4
50s ribosomal protein l9CVE23_RS17955Not Available-4005354 - 400580315668.8
30s ribosomal protein s18CVE23_RS17960Not Available-4005845 - 40060728986.94

Displaying genes 3541 – 3550 of 4446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001650N-acetyl-9-O-acetylneuraminateC13H20NO10Chemical structure of N-acetyl-9-O-acetylneuraminateNot available
Average350.301Da
Monoisotopic350.109269428Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002396scyllo-inosineC6H10O6Chemical structure of scyllo-inosineNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–5 of 5 metabolites