Dickeya fangzhongdai strain DSM 101947

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya fangzhongdai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya fangzhongdai strain DSM 101947

Accession NumberNZ_CP025003.1

Gene Summary

Adenine Count

1086499 bp

Thymine Count

1087221 bp

Guanine Count

1423061 bp

Cytosine Count

1430382 bp

Genome Length

5027163 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
alanine transaminaseCVE23_RS15245Not Available-3443345 - 344458645960.3
d-amino-acid transaminaseCVE23_RS15250Not Available+3445004 - 344586432127.3
duf3772 domain-containing proteinCVE23_RS15255Not Available-3445958 - 344840288237.5
Trna-argNot AvailableNot Available+3448738 - 3448814Not Available
lysr family transcriptional regulatorCVE23_RS15265Not Available-3449089 - 345003334074.3
nad-dependent succinate-semialdehyde dehydrogenaseCVE23_RS15270Not Available+3450154 - 345159351415.6
carboxymuconolactone decarboxylase family proteinCVE23_RS15275Not Available+3451635 - 345196711891.1
nad(p)h-quinone oxidoreductaseCVE23_RS15280Not Available+3452037 - 345301735062.4
cupin domain-containing proteinCVE23_RS15285Not Available+3453266 - 345438742587.2
yjfb family proteinCVE23_RS15290Not Available+3454653 - 34548416499.75

Displaying genes 3091 – 3100 of 4453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001650N-acetyl-9-O-acetylneuraminateC13H20NO10Chemical structure of N-acetyl-9-O-acetylneuraminateNot available
Average350.301Da
Monoisotopic350.109269428Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002396scyllo-inosineC6H10O6Chemical structure of scyllo-inosineNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–5 of 5 metabolites