Dickeya fangzhongdai strain DSM 101947

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya fangzhongdai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya fangzhongdai strain DSM 101947

NZ_CP025004.1NZ_CP025003.1

Gene Summary

Adenine Count

1282 bp

Thymine Count

1519 bp

Guanine Count

1169 bp

Cytosine Count

1314 bp

Genome Length

5284 bp

Protein-coding Genes

7 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
beta-galactosidaseCVE23_RS08055Not Available-1774263 - 1777376118668.0
laci family dna-binding transcriptional regulatorCVE23_RS08060Not Available-1777559 - 177863238816.7
aspartate/glutamate racemase family proteinCVE23_RS08065Not Available-1778720 - 177943626322.0
hypochlorite stress dna-binding transcriptional regulator hyptCVE23_RS08070Not Available+1779589 - 178048234125.9
dicarboxylate/amino acid:cation symporterCVE23_RS08075Not Available-1780537 - 178182646489.8
formate hydrogenlyase transcriptional activator flhaCVE23_RS08080Not Available+1782740 - 178492081270.1
formate dehydrogenase subunit alphaCVE23_RS08085Not Available-1784989 - 178713979130.5
4fe-4s dicluster domain-containing proteinCVE23_RS08090Not Available-1787174 - 178771619676.0
duf4160 domain-containing proteinCVE23_RS08095Not Available+1788214 - 17884719978.13
dna-binding proteinCVE23_RS08100Not Available+1788479 - 178896717941.5

Displaying genes 1711 – 1720 of 4453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

10 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002002glyoxylateC2HO3Chemical structure of glyoxylateNot available
Average73.0275Da
Monoisotopic72.9925689Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0010449N(6)-(D-ribulosyl)-L-lysineC11H23N2O6Chemical structure of N(6)-(D-ribulosyl)-L-lysineNot available
Average279.312Da
Monoisotopic279.1550629Da
BASm0010451N(6)-(3-O-phospho-D-ribulosyl)-L-lysineC11H22N2O9PChemical structure of N(6)-(3-O-phospho-D-ribulosyl)-L-lysineNot available
Average357.276Da
Monoisotopic357.1068409Da
BASm0010454N(6)-(D-erythrulosyl)-L-lysineC10H21N2O5Chemical structure of N(6)-(D-erythrulosyl)-L-lysineNot available
Average249.286Da
Monoisotopic249.1444982Da
BASm0010455N(6)-(3-O-phospho-D-erythrulosyl)-L-lysineC10H20N2O8PChemical structure of N(6)-(3-O-phospho-D-erythrulosyl)-L-lysineNot available
Average327.25Da
Monoisotopic327.09627619Da

Displaying 1–10 of 10 metabolites