Dickeya fangzhongdai strain DSM 101947

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya fangzhongdai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya fangzhongdai strain DSM 101947

Accession NumberNZ_CP025003.1

Gene Summary

Adenine Count

1086499 bp

Thymine Count

1087221 bp

Guanine Count

1423061 bp

Cytosine Count

1430382 bp

Genome Length

5027163 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
transcription antiterminator/rna stability regulator cspeCVE23_RS06510Not Available+1413850 - 14140597395.75
fluoride efflux transporter crcbCVE23_RS06515Not Available-1414128 - 141451113715.1
deaminated glutathione amidaseCVE23_RS06520Not Available+1414719 - 141550728718.1
sec-independent protein translocase subunit tataCVE23_RS06525Not Available+1415661 - 14158767419.02
lipoyl synthaseCVE23_RS06530Not Available-1415982 - 141694736347.1
lipoyl(octanoyl) transferase lipbCVE23_RS06535Not Available-1417128 - 141782025436.5
duf493 family protein ybedCVE23_RS06540Not Available-1418011 - 14182749869.02
d-alanyl-d-alanine carboxypeptidase dacaCVE23_RS06545Not Available-1418408 - 141961944289.2
endolytic peptidoglycan transglycosylase rlpaCVE23_RS06550Not Available-1419799 - 142095040068.2
peptidoglycan glycosyltransferase mrdbCVE23_RS06555Not Available-1420960 - 142207240485.4

Displaying genes 1401 – 1410 of 4446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001650N-acetyl-9-O-acetylneuraminateC13H20NO10Chemical structure of N-acetyl-9-O-acetylneuraminateNot available
Average350.301Da
Monoisotopic350.109269428Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002396scyllo-inosineC6H10O6Chemical structure of scyllo-inosineNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–5 of 5 metabolites