Dickeya fangzhongdai strain DSM 101947

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya fangzhongdai
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya fangzhongdai strain DSM 101947

Accession NumberNZ_CP025003.1

Gene Summary

Adenine Count

1086499 bp

Thymine Count

1087221 bp

Guanine Count

1423061 bp

Cytosine Count

1430382 bp

Genome Length

5027163 bp

Protein-coding Genes

4248 genes

Non-Coding Genes

198 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phosphoribosylglycinamide formyltransferaseCVE23_RS06410Not Available-1395189 - 139582722915.2
phosphoribosylformylglycinamidine cyclo-ligaseCVE23_RS06415Not Available-1395827 - 139686436798.0
uracil phosphoribosyltransferaseCVE23_RS06420Not Available+1397137 - 139776322537.8
uracil permeaseCVE23_RS06425Not Available+1397944 - 139923344991.7
dnaa inactivator hdaCVE23_RS06430Not Available+1399349 - 140005626750.2
arsenate reductase (glutaredoxin)CVE23_RS06435Not Available-1400066 - 140042213180.1
tetratricopeptide repeat proteinCVE23_RS06440Not Available-1400438 - 140190153543.6
thioredoxin-dependent thiol peroxidaseCVE23_RS06445Not Available-1402077 - 140254417320.6
glycine cleavage system transcriptional repressorCVE23_RS06450Not Available-1402547 - 140311620887.1
4-hydroxy-tetrahydrodipicolinate synthaseCVE23_RS06455Not Available+1403264 - 140414231247.7

Displaying genes 1381 – 1390 of 4446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0001650N-acetyl-9-O-acetylneuraminateC13H20NO10Chemical structure of N-acetyl-9-O-acetylneuraminateNot available
Average350.301Da
Monoisotopic350.109269428Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0002396scyllo-inosineC6H10O6Chemical structure of scyllo-inosineNot available
Average178.14Da
Monoisotopic178.047738042Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da

Displaying 1–5 of 5 metabolites