Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga crassostreae |
| Strain | strain LPB0072 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
959813 bp
Thymine Count
953339 bp
Guanine Count
1515691 bp
Cytosine Count
1515289 bp
Genome Length
4944132 bp
Protein-coding Genes
4558 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit beta | LPB072_RS00010 | Not Available | + | 1540 - 2646 | 40447.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | LPB072_RS00015 | Not Available | + | 2728 - 5361 | 96217.7 |
| ferredoxin--nadp reductase | LPB072_RS00020 | Not Available | + | 5506 - 6279 | 28907.7 |
| zinc-binding dehydrogenase | LPB072_RS00025 | Not Available | + | 6551 - 7702 | 40476.1 |
| acyl-coa dehydrogenase | LPB072_RS00030 | Not Available | + | 7905 - 10043 | 76054.5 |
| duf2075 domain-containing protein | LPB072_RS00035 | Not Available | + | 10290 - 12275 | 74356.3 |
| hypothetical protein | LPB072_RS00040 | Not Available | - | 12302 - 12712 | 15875.5 |
| acylphosphatase | LPB072_RS00045 | Not Available | - | 12837 - 13133 | 10676.6 |
| atpase p | LPB072_RS00050 | Not Available | - | 13130 - 13309 | 6343.47 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | LPB072_RS00055 | Not Available | - | 13405 - 14004 | 20496.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
